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  5. AMTR_s00045p00176400

AMTR_s00045p00176400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.212

Description : Probable glutamyl endopeptidase, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0005535 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00176400
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Adi_g109170 No alias S9-class plastidial glutamyl peptidase *(CGEP) &... 0.02 OrthoFinder output from all 47 species
Aev_g02540 No alias S9-class plastidial glutamyl peptidase *(CGEP) &... 0.03 OrthoFinder output from all 47 species
Ala_g14075 No alias S9-class plastidial glutamyl peptidase *(CGEP) &... 0.03 OrthoFinder output from all 47 species
Cre07.g313122 No alias Probable glutamyl endopeptidase, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dcu_g03131 No alias S9-class plastidial glutamyl peptidase *(CGEP) &... 0.02 OrthoFinder output from all 47 species
LOC_Os03g19410.1 LOC_Os03g19410 Probable glutamyl endopeptidase, chloroplastic OS=Oryza... 0.04 OrthoFinder output from all 47 species
MA_10433229g0010 No alias Probable glutamyl endopeptidase, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Msp_g00707 No alias S9-class plastidial glutamyl peptidase *(CGEP) &... 0.04 OrthoFinder output from all 47 species
Ore_g37597 No alias S9-class plastidial glutamyl peptidase *(CGEP) &... 0.03 OrthoFinder output from all 47 species
Sam_g27975 No alias S9-class plastidial glutamyl peptidase *(CGEP) &... 0.03 OrthoFinder output from all 47 species
Solyc01g079450.3.1 Solyc01g079450 Probable glutamyl endopeptidase, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g11436 No alias S9-class plastidial glutamyl peptidase *(CGEP) &... 0.02 OrthoFinder output from all 47 species
Zm00001e001435_P001 Zm00001e001435 Probable glutamyl endopeptidase, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016841 ammonia-lyase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001375 Peptidase_S9 674 842
No external refs found!