Sequence Description Alias PCC hrr AMTR_s00071p00100010 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00071.77 0.9624796761501054 1 AMTR_s00071p00175860 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic40 component TIC40, ATTIC40, PDE120, evm_27.TU.AmTr_v1.0_scaffold00071.178 0.933961618512399 4 AMTR_s00036p00227770 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component evm_27.TU.AmTr_v1.0_scaffold00036.169 0.9335537773234546 3 AMTR_s00052p00118920 Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00052.39 0.9261051269808408 4 AMTR_s00001p00224830 evm_27.TU.AmTr_v1.0_scaffold00001.236 0.9258369617020469 5 AMTR_s00177p00048180 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.25 0.9234856523328424 6 AMTR_s00099p00147110 EMB140, evm_27.TU.AmTr_v1.0_scaffold00099.133 0.9217618227570552 36 AMTR_s00061p00109710 Proteasome activator subunit 4 OS=Arabidopsis thaliana PA200, evm_27.TU.AmTr_v1.0_scaffold00061.84 0.9208425394379233 8 AMTR_s00056p00038090 RNA processing.ribonuclease activities.RNase Z endoribonuclease TRZ4, evm_27.TU.AmTr_v1.0_scaffold00056.21 0.919043208320125 88 AMTR_s00057p00185220 Probable serine/threonine-protein phosphatase 2A regulatory subunit B subunit TON2 OS=Arabidopsis thaliana GDO, FASS 2, EMB40, TON2, FASS, FS1, evm_27.TU.AmTr_v1.0_scaffold00057.200 0.9171961326459394 33 AMTR_s00078p00105470 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase AMY3, ATAMY3, evm_27.TU.AmTr_v1.0_scaffold00078.76 0.9169490701131974 11 AMTR_s00022p00070510 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase evm_27.TU.AmTr_v1.0_scaffold00022.51 0.9163219187700596 20 AMTR_s00009p00220110 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M1 neutral/aromatic-hydroxyl amino acid aminopeptidase evm_27.TU.AmTr_v1.0_scaffold00009.158 0.9151556549906337 13 AMTR_s00131p00071060 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase PDS3, PDS, PDE226, evm_27.TU.AmTr_v1.0_scaffold00131.42 0.9131099223354932 29 AMTR_s00049p00163880 Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidopsis thaliana EMB1006, evm_27.TU.AmTr_v1.0_scaffold00049.150 0.9129073071475441 15 AMTR_s00049p00226280 Chloroplast sensor kinase, chloroplastic OS=Arabidopsis thaliana CSK, evm_27.TU.AmTr_v1.0_scaffold00049.272 0.9127017888510937 20 AMTR_s00006p00246940 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamine-tRNA ligase OVA9, evm_27.TU.AmTr_v1.0_scaffold00006.134 0.9122760639753141 17 AMTR_s00106p00063870 evm_27.TU.AmTr_v1.0_scaffold00106.40 0.9098187011924164 19 AMTR_s00025p00212870 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00025.284 0.9094224152247082 50 AMTR_s00088p00159600 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00088.130 0.9091899314761954 20 AMTR_s00202p00037220 Disease resistance protein RPM1 OS=Arabidopsis thaliana RPM1, RPS3, evm_27.TU.AmTr_v1.0_scaffold00202.14 0.908738583533188 21 AMTR_s00080p00074320 Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.23 0.9086200870861857 85 AMTR_s00003p00075520 Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GUN1, evm_27.TU.AmTr_v1.0_scaffold00003.43 0.9078858300571682 25 AMTR_s00032p00225290 evm_27.TU.AmTr_v1.0_scaffold00032.241 0.9076636846193036 89 AMTR_s00057p00042800 RNA biosynthesis.transcriptional activation.CAMTA transcription factor evm_27.TU.AmTr_v1.0_scaffold00057.23 0.9058781622380422 26 AMTR_s00101p00092980 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana FAS4, ATFAS4, evm_27.TU.AmTr_v1.0_scaffold00101.70 0.9052722636108055 33 AMTR_s00053p00190690 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor ATINO80, INO80, evm_27.TU.AmTr_v1.0_scaffold00053.139 0.9039464883022295 51 AMTR_s00061p00182640 RNA processing.organelle machineries.ribonuclease activities.RNase E endoribonuclease RNEE/G, evm_27.TU.AmTr_v1.0_scaffold00061.204 0.903803269946531 82 AMTR_s00011p00266560 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.AEF1 RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00011.231 0.903682530053693 31 AMTR_s00048p00066880 Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana NHL8, evm_27.TU.AmTr_v1.0_scaffold00048.27 0.9023964353033093 33 AMTR_s00010p00149200 Phytohormones.auxin.synthesis.indole-3-acetamide (IAM) pathway.indole-3-acetamide hydrolase atToc64-III, TOC64-III, evm_27.TU.AmTr_v1.0_scaffold00010.107 0.9016450314134471 34 AMTR_s00092p00062310 Coenzyme metabolism.NAD/NADP biosynthesis.NAD synthase evm_27.TU.AmTr_v1.0_scaffold00092.27 0.9011131986475591 90 AMTR_s00033p00216190 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.DRP3 dynamin-like protein DRP3A, ADL2, evm_27.TU.AmTr_v1.0_scaffold00033.191 0.9010509417911209 36 AMTR_s00021p00151130 evm_27.TU.AmTr_v1.0_scaffold00021.107 0.9007707088423604 37 AMTR_s00021p00250570 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP5 phosphatase PP5, PAPP5, PP5.2, evm_27.TU.AmTr_v1.0_scaffold00021.284 0.8996750318714204 38 AMTR_s00080p00141940 tRNA ligase 1 OS=Arabidopsis thaliana ATRNL, AtRLG1, RNL, evm_27.TU.AmTr_v1.0_scaffold00080.64 0.8993977718636877 44 AMTR_s00019p00220910 Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.279 0.8987860701052239 42 AMTR_s00059p00150840 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.137 0.8985513821447427 43 AMTR_s00008p00166810 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme ATISA3, ISA3, evm_27.TU.AmTr_v1.0_scaffold00008.90 0.8985006271188833 44 AMTR_s00007p00268660 evm_27.TU.AmTr_v1.0_scaffold00007.394 0.8978604814691848 45 AMTR_s00012p00252410 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III, evm_27.TU.AmTr_v1.0_scaffold00012.260 0.8977579284000384 55 AMTR_s00030p00238130 At-RS31a, RS31a, evm_27.TU.AmTr_v1.0_scaffold00030.204 0.897526663161005 47 AMTR_s00040p00181990 Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica INV-E, At-A/N-InvE, evm_27.TU.AmTr_v1.0_scaffold00040.175 0.8973063342444054 48 AMTR_s00100p00112150 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS8 CORVET-specific component evm_27.TU.AmTr_v1.0_scaffold00100.35 0.8967969104661444 70 AMTR_s00048p00132600 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana EMB976, evm_27.TU.AmTr_v1.0_scaffold00048.78 0.8966866831655433 76 AMTR_s00012p00204440 Lipid metabolism.lipid transport.plastidial lipid import.TGD lipid importer complex.TGD2 substrate binding component TGD2, evm_27.TU.AmTr_v1.0_scaffold00012.139 0.8962398491014657 52 AMTR_s00046p00223780 Protein degradation.peptidase families.metallopeptidase activities.M3 protease evm_27.TU.AmTr_v1.0_scaffold00046.160 0.8954179525646456 57 AMTR_s00071p00038040 Lipid metabolism.glycerolipid synthesis.phosphatidylethanolamine.phosphatidylserine decarboxylation pathway.extramitochondrial phosphatidylserine decarboxylase PSD2, evm_27.TU.AmTr_v1.0_scaffold00071.20 0.8952495359132127 92 AMTR_s00066p00130420 Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.123 0.8950377946702984 55 AMTR_s00029p00131600 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor complex.large subunit evm_27.TU.AmTr_v1.0_scaffold00029.149 0.8948204525374218 57 AMTR_s00058p00198540 Protein modification.phosphorylation.STE kinase superfamily.MAP4K kinase evm_27.TU.AmTr_v1.0_scaffold00058.200 0.8944031624634288 60 AMTR_s00002p00234380 evm_27.TU.AmTr_v1.0_scaffold00002.271 0.8938862293541199 61 AMTR_s00046p00153230 evm_27.TU.AmTr_v1.0_scaffold00046.81 0.8937241429011409 62 AMTR_s00209p00023450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00209.4 0.8934349550219755 67 AMTR_s00002p00190720 Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.170 0.8933710968414856 64 AMTR_s00079p00107040 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays EMB1865, evm_27.TU.AmTr_v1.0_scaffold00079.39 0.892004436308456 83 AMTR_s00003p00269470 evm_27.TU.AmTr_v1.0_scaffold00003.408 0.8907212283693402 80 AMTR_s00003p00081550 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00003.47 0.8906625925014213 71 AMTR_s00682p00010920 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component SPT16, evm_27.TU.AmTr_v1.0_scaffold00682.1 0.8897811223307189 80 AMTR_s00133p00020030 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.Whirly-type splicing factor ATWHY1, WHY1, PTAC1, evm_27.TU.AmTr_v1.0_scaffold00133.2 0.8896440897653454 74 AMTR_s00067p00205070 Protein translocation.peroxisome.importomer translocation system.receptor monoubiquitination system.Pex12 component PEX12, ATPEX12, APM4, evm_27.TU.AmTr_v1.0_scaffold00067.225 0.888982009381283 75 AMTR_s00067p00091740 Protein biosynthesis.translation elongation.diphthamide-modification of eEF2.DPH6 diphthamide synthetase evm_27.TU.AmTr_v1.0_scaffold00067.69 0.8876928810793442 79 AMTR_s00161p00056860 Cellular respiration.glycolysis.methylglyoxal degradation.GLX1 lactoyl-glutathione lyase evm_27.TU.AmTr_v1.0_scaffold00161.22 0.8876858637262651 80 AMTR_s00163p00072710 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00163.29 0.8872827593472095 82 AMTR_s00092p00052470 Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana 0.8872369518912959 83 AMTR_s00066p00197720 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.260 0.8862236546898737 85 AMTR_s00164p00040330 evm_27.TU.AmTr_v1.0_scaffold00164.15 0.8851913663085894 93 AMTR_s00155p00027590 Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana EMB2279, EMB88, evm_27.TU.AmTr_v1.0_scaffold00155.11 0.884604224388988 97