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  5. AMTR_s00025p00238590

AMTR_s00025p00238590 (APAO, ATPAO1, PAO1,...)


Aliases : APAO, ATPAO1, PAO1, evm_27.TU.AmTr_v1.0_scaffold00025.360

Description : Polyamine metabolism.spermidine/spermine.degradation.polyamine oxidase


Gene families : OG0001779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00238590
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Adi_g009450 APAO, ATPAO1, PAO1 EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.03 OrthoFinder output from all 47 species
Aop_g55748 APAO, ATPAO1, PAO1 EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06351.t1 APAO, ATPAO1,... EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene57105.t1 APAO, ATPAO1,... EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.03 OrthoFinder output from all 47 species
Ceric.30G040300.1 Ceric.30G040300 not classified & original description: pacid=50607943... 0.04 OrthoFinder output from all 47 species
Ceric.30G040400.1 APAO, ATPAO1,... EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.03 OrthoFinder output from all 47 species
Dcu_g10126 APAO, ATPAO1, PAO1 EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01013729001 APAO, ATPAO1, PAO1 Polyamine... 0.03 OrthoFinder output from all 47 species
Gb_23546 APAO, ATPAO1, PAO1 cytosolic polyamine oxidase (PAO1) 0.04 OrthoFinder output from all 47 species
Gb_35100 APAO, ATPAO1, PAO1 cytosolic polyamine oxidase (PAO1) 0.05 OrthoFinder output from all 47 species
MA_10392400g0010 APAO, ATPAO1, PAO1 Enzyme classification.EC_1 oxidoreductases.EC_1.5... 0.03 OrthoFinder output from all 47 species
MA_104215g0010 APAO, ATPAO1, PAO1 Enzyme classification.EC_1 oxidoreductases.EC_1.5... 0.03 OrthoFinder output from all 47 species
MA_10435694g0010 APAO, ATPAO1, PAO1 cytosolic polyamine oxidase (PAO1) 0.03 OrthoFinder output from all 47 species
Ore_g13092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30838 APAO, ATPAO1, PAO1 EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.03 OrthoFinder output from all 47 species
Solyc01g087590.3.1 APAO, ATPAO1,... cytosolic polyamine oxidase (PAO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 208 434
IPR002937 Amino_oxidase 18 88
No external refs found!