Aliases : 54CP, SRP54CP, CPSRP54, FFC
Description : component *(cpSRP54) of thylakoid membrane SRP insertion system & original description: none
Gene families : OG0002699 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0002699_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g09277 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.01 | OrthoFinder output from all 39 species | |
Aob_g00097 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 39 species | |
Aob_g13062 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.01 | OrthoFinder output from all 39 species | |
Aop_g31519 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.02 | OrthoFinder output from all 39 species | |
Aspi01Gene03016.t1 | 54CP, SRP54CP,... | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
Aspi01Gene03019.t1 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.01 | OrthoFinder output from all 39 species | |
Ceric.03G060800.1 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.04 | OrthoFinder output from all 39 species | |
Dac_g21514 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.01 | OrthoFinder output from all 39 species | |
Dde_g10157 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.02 | OrthoFinder output from all 39 species | |
Msp_g47300 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.01 | OrthoFinder output from all 39 species | |
Nbi_g12082 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.02 | OrthoFinder output from all 39 species | |
Pir_g60389 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 39 species | |
Pnu_g31976 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.02 | OrthoFinder output from all 39 species | |
Ppi_g12402 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.01 | OrthoFinder output from all 39 species | |
Sacu_v1.1_s0079.g017848 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 39 species | |
Sacu_v1.1_s0444.g027392 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 39 species | |
Spa_g21337 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.01 | OrthoFinder output from all 39 species | |
Tin_g12383 | 54CP, SRP54CP,... | component *(cpSRP54) of thylakoid membrane SRP insertion... | 0.01 | OrthoFinder output from all 39 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEA | Interproscan |
MF | GO:0008312 | 7S RNA binding | IEA | Interproscan |
CC | GO:0048500 | signal recognition particle | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004813 | alanine-tRNA ligase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0071949 | FAD binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No external refs found! |