Aliases : EMB251, RFC3, EMB161, EMB2775, evm_27.TU.AmTr_v1.0_scaffold00004.79
Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component
Gene families : OG0003475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003475_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Azfi_s1584.g104475 | EMB251, RFC3,... | component *(RFC3) of PCNA sliding clamp loader complex &... | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g679950 | EMB251, RFC3,... | Cell cycle.interphase.DNA... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01022436001 | EMB251, RFC3,... | Cell cycle.interphase.DNA... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g57870.1 | EMB251, RFC3,... | component RFC3 of PCNA sliding clamp loader complex | 0.02 | OrthoFinder output from all 47 species | |
MA_10426511g0010 | EMB251, RFC3,... | Replication factor C subunit 3 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Smo121188 | EMB251, RFC3,... | Cell cycle.interphase.DNA... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g020440.3.1 | EMB251, RFC3,... | component RFC3 of PCNA sliding clamp loader complex | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e005947_P001 | EMB251, RFC3,... | component RFC3 of PCNA sliding clamp loader complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016073 | snRNA metabolic process | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
MF | GO:0030515 | snoRNA binding | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0031120 | snRNA pseudouridine synthesis | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0040031 | snRNA modification | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013748 | Rep_factorC_C | 252 | 337 |
No external refs found! |