Aev_g05302

Description : proline-tRNA ligase & original description: none

Gene families : OG0001971 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001971_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g05302

Target	Alias	Description	ECC score	Gene Family Method
AT3G62120	No alias	Class II aaRS and biotin synthetases superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g010533	No alias	proline-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g11327	No alias	proline-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021463.3	OVA6, PRORS1	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.01	OrthoFinder output from all 47 species
Cre10.g429100	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Dcu_g02781	No alias	proline-tRNA ligase & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g00716	No alias	proline-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g02585	No alias	proline-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01028250001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
LOC_Os12g25710.1	LOC_Os12g25710	proline-tRNA ligase	0.04	OrthoFinder output from all 47 species
Mp2g25470.1	No alias	proline-tRNA ligase	0.07	OrthoFinder output from all 47 species
Nbi_g12513	No alias	proline-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g01128	No alias	proline-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000100	OVA6, PRORS1	proline-tRNA ligase & original description: CDS=54-1670	0.03	OrthoFinder output from all 47 species
Sam_g11315	No alias	proline-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Smo74713	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
Solyc01g096870.4.1	OVA6, PRORS1,...	proline-tRNA ligase	0.03	OrthoFinder output from all 47 species
Solyc06g068320.3.1	Solyc06g068320	proline-tRNA ligase	0.06	OrthoFinder output from all 47 species
Spa_g09904	No alias	proline-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g15505	No alias	proline-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e007170_P001	Zm00001e007170	proline-tRNA ligase	0.05	OrthoFinder output from all 47 species
Zm00001e024670_P003	Zm00001e024670	proline-tRNA ligase	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	None	Extended
MF	GO:0004827	proline-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	None	Extended
BP	GO:0006433	prolyl-tRNA aminoacylation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
MF	GO:0004814	arginine-tRNA ligase activity	IEP	HCCA
MF	GO:0004819	glutamine-tRNA ligase activity	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006425	glutaminyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008318	protein prenyltransferase activity	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0018342	protein prenylation	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0097354	prenylation	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004154	Anticodon-bd	360	454
IPR002314	aa-tRNA-synt_IIb	175	341
IPR016061	Pro-tRNA_ligase_II_C	483	556

External Links

No external refs found!

Aev_g05302

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation