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  5. Dac_g21585

Dac_g21585 (OVA5, ATKRS-2)


Aliases : OVA5, ATKRS-2

Description : lysine-tRNA ligase & original description: none


Gene families : OG0005865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g21585

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00093330 OVA5, ATKRS-2,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
AT3G13490 OVA5, ATKRS-2 Lysyl-tRNA synthetase, class II 0.04 OrthoFinder output from all 47 species
Adi_g081278 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011549 OVA5, ATKRS-2 lysine-tRNA ligase & original description: CDS=158-1798 0.03 OrthoFinder output from all 47 species
GSVIVT01025473001 OVA5, ATKRS-2 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Gb_05325 OVA5, ATKRS-2 lysine-tRNA ligase 0.04 OrthoFinder output from all 47 species
Len_g27813 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g09810.1 OVA5, ATKRS-2 lysine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Nbi_g08031 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65469 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03084 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15740 No alias lysine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Smo79851 OVA5, ATKRS-2 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Zm00001e006285_P003 OVA5, ATKRS-2,... lysine-tRNA ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004364 Aa-tRNA-synt_II 235 603
IPR004365 NA-bd_OB_tRNA 139 216
No external refs found!