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  5. Dac_g10266

Dac_g10266 (EIF4A-2)


Aliases : EIF4A-2

Description : mRNA unwinding factor *(eIF4A)) & original description: none


Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g10266

Target Alias Description ECC score Gene Family Method Actions
AT1G51380 No alias DEA(D/H)-box RNA helicase family protein 0.03 OrthoFinder output from all 47 species
AT1G72730 No alias DEA(D/H)-box RNA helicase family protein 0.03 OrthoFinder output from all 47 species
AT3G13920 TIF4A1, EIF4A1, RH4 eukaryotic translation initiation factor 4A1 0.04 OrthoFinder output from all 47 species
Adi_g087856 EIF4A-III not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12366 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03168 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03471 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13177 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0064.g035634 EIF4A-III not classified & original description: CDS=274-1275 0.03 OrthoFinder output from all 47 species
Azfi_s0242.g059785 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g71080 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75441 EIF4A-2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.21G079100.1 EIF4A-2, Ceric.21G079100 mRNA unwinding factor *(eIF4A)) & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.22 EIF4A-III RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Cre03.g199647 EIF4A-III RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Cre06.g298650 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.01 OrthoFinder output from all 47 species
Dde_g04331 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.03 OrthoFinder output from all 47 species
Len_g10654 EIF4A-2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g02760.1 EIF4A-2 mRNA unwinding factor (eIF4A) 0.06 OrthoFinder output from all 47 species
Msp_g08580 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03558 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13467 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14903 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.03 OrthoFinder output from all 47 species
Pir_g20207 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_1080V3.1 EIF4A-2, Pp3c6_1080 eukaryotic translation initiation factor 4A1 0.01 OrthoFinder output from all 47 species
Pp3c7_3770V3.1 EIF4A-2, Pp3c7_3770 eukaryotic translation initiation factor 4A1 0.01 OrthoFinder output from all 47 species
Sam_g23496 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g35004 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Smo143895 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.04 OrthoFinder output from all 47 species
Solyc08g062800.3.1 EIF4A-2, Solyc08g062800 mRNA unwinding factor (eIF4A) 0.05 OrthoFinder output from all 47 species
Solyc11g033280.2.1 EIF4A-III, Solyc11g033280 helicase component eIF4A3 of RNA quality control Exon... 0.04 OrthoFinder output from all 47 species
Solyc12g095990.2.1 EIF4A-2, Solyc12g095990 mRNA unwinding factor (eIF4A) 0.02 OrthoFinder output from all 47 species
Spa_g20030 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03386 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05567 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013648_P002 EIF4A-2, Zm00001e013648 mRNA unwinding factor (eIF4A) 0.03 OrthoFinder output from all 47 species
Zm00001e016284_P001 EIF4A-III, Zm00001e016284 helicase component eIF4A3 of RNA quality control Exon... 0.03 OrthoFinder output from all 47 species
Zm00001e030233_P004 EIF4A-2, Zm00001e030233 mRNA unwinding factor (eIF4A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 266 374
IPR011545 DEAD/DEAH_box_helicase_dom 65 226
No external refs found!