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Aliases : ATHM2
Description : thioredoxin *(TRX-M) & original description: none
Gene families : OG0001012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001012_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00016000 | ATHM2,... | Redox homeostasis.chloroplast redox homeostasis.M-type... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G03680 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin M-type 1 | 0.07 | OrthoFinder output from all 47 species | |
| AT3G15360 | ATHM4, TRX-M4, ATM4 | thioredoxin M-type 4 | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g086491 | ATHM4, TRX-M4, ATM4 | thioredoxin *(TRX-M) & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g107265 | ATHM4, TRX-M4, ATM4 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g32022 | ATHM4, TRX-M4, ATM4 | thioredoxin *(TRX-M) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09870 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin *(TRX-M) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g23908 | ATHM4, TRX-M4, ATM4 | thioredoxin *(TRX-M) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12040 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Als_g21943 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin *(TRX-M) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g48830 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Als_g58971 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04875 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Aob_g08794 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g24176 | ATHM4, TRX-M4, ATM4 | thioredoxin *(TRX-M) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Aob_g39548 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Aop_g11048 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| Aspi01Gene11662.t1 | ATHM2, Aspi01Gene11662 | thioredoxin *(TRX-M) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene35886.t2 | ATHM2, Aspi01Gene35886 | thioredoxin *(TRX-M) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0087.g042425 | ATHM4, TRX-M4, ATM4 | thioredoxin *(TRX-M) & original description: CDS=1-594 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0110.g045543 | ATHM4, TRX-M4, ATM4 | thioredoxin *(TRX-M) & original description: CDS=236-865 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0144.g051537 | ATHM4, TRX-M4, ATM4 | thioredoxin *(TRX-M) & original description: CDS=12-806 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g19197 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g23725 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin *(TRX-M) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.09G062900.1 | ATHM2, Ceric.09G062900 | thioredoxin *(TRX-M) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.23G041700.1 | ATHM2, Ceric.23G041700 | thioredoxin *(TRX-M) & original description:... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.30G036000.1 | ATHM1, THM1,... | thioredoxin *(TRX-M) & original description:... | 0.11 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001477.10 | ATHM4, TRX-M4, ATM4 | Redox homeostasis.chloroplast redox homeostasis.X-type... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g06755 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g14399 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin *(TRX-M) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21277 | ATHM4, TRX-M4, ATM4 | thioredoxin *(TRX-M) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g43031 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g49300 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g02608 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin *(TRX-M) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Ehy_g03185 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g08153 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g09639 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01010012001 | ATHM4, TRX-M4, ATM4 | Redox homeostasis.chloroplast redox homeostasis.M-type... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_00914 | ATHM2 | M-type thioredoxin | 0.07 | OrthoFinder output from all 47 species | |
| Gb_31181 | ATHM2 | M-type thioredoxin | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os12g08730.1 | ATHM2, LOC_Os12g08730 | M-type thioredoxin | 0.06 | OrthoFinder output from all 47 species | |
| Len_g07374 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Len_g09823 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin *(TRX-M) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Len_g16078 | ATHM4, TRX-M4, ATM4 | thioredoxin *(TRX-M) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Len_g21827 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_474303g0010 | ATHM2 | M-type thioredoxin | 0.05 | OrthoFinder output from all 47 species | |
| Mp4g18950.1 | ATHM1, THM1, TRX-M1, ATM1 | M-type thioredoxin | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g12620 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| Nbi_g06481 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin *(TRX-M) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10092 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g28088 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10112 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Pnu_g10809 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c25_2880V3.1 | ATHM1, THM1,... | thioredoxin M-type 1 | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02691 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Ppi_g22064 | ATHM4, TRX-M4, ATM4 | thioredoxin *(TRX-M) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Sam_g07636 | No alias | thioredoxin *(TRX-M) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g07637 | No alias | thioredoxin *(TRX-M) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g24018 | No alias | thioredoxin *(TRX-M) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Smo230724 | ATHM2 | Redox homeostasis.chloroplast redox homeostasis.M-type... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g063190.3.1 | ATHM4, TRX-M4,... | M-type thioredoxin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g006970.3.1 | ATHM4, TRX-M4,... | M-type thioredoxin | 0.06 | OrthoFinder output from all 47 species | |
| Solyc12g013810.2.1 | ATHM4, TRX-M4,... | M-type thioredoxin | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g06831 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06833 | ATHM2 | thioredoxin *(TRX-M) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g19071 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin *(TRX-M) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g52025 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin *(TRX-M) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Tin_g00552 | ATHM1, THM1, TRX-M1, ATM1 | thioredoxin *(TRX-M) & original description: none | 0.17 | OrthoFinder output from all 47 species | |
| Zm00001e018385_P001 | ATHM4, TRX-M4,... | M-type thioredoxin | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e039586_P001 | ATHM2, Zm00001e039586 | M-type thioredoxin | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003951 | NAD+ kinase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006739 | NADP metabolic process | IEP | HCCA |
| BP | GO:0006741 | NADP biosynthetic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013766 | Thioredoxin_domain | 82 | 179 |
| No external refs found! |