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  5. Cre10.g436350

Cre10.g436350 (SK1, ATSK1)


Aliases : SK1, ATSK1

Description : Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase


Gene families : OG0001829 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001829_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g436350

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00187060 ATSKL1, SKL1,... Amino acid metabolism.biosynthesis.shikimate... 0.01 OrthoFinder output from all 47 species
Adi_g052782 ATSKL1, SKL1 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aev_g12920 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Ala_g25143 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Aop_g27497 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25193.t1 SK1, ATSK1,... EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Azfi_s0376.g067283 SK2, ATSK2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cba_g11685 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cba_g39022 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
GSVIVT01033029001 ATSKL1, SKL1 Amino acid metabolism.biosynthesis.shikimate... 0.01 OrthoFinder output from all 47 species
LOC_Os06g12150.1 SK1, ATSK1,... shikimate kinase 0.01 OrthoFinder output from all 47 species
MA_10427362g0010 SK1, ATSK1 shikimate kinase 0.02 OrthoFinder output from all 47 species
Msp_g47623 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011558 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sam_g50034 No alias EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Solyc02g094420.3.1 ATSKL1, SKL1,... shikimate kinase 0.08 OrthoFinder output from all 47 species
Solyc04g051860.3.1 SK1, ATSK1,... shikimate kinase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0005044 scavenger receptor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0038024 cargo receptor activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR031322 Shikimate/glucono_kinase 112 263
No external refs found!