Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase
Gene families : OG0003763 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003763_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre03.g189400 | |
Cluster | HCCA: Cluster_33 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00057p00038540 | evm_27.TU.AmTr_v1... | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.01 | OrthoFinder output from all 47 species | |
AT5G27470 | No alias | seryl-tRNA synthetase / serine--tRNA ligase | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0007.g010712 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G103200.1 | Ceric.02G103200 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.09 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020610.57 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g14386 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g14826 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g37837.1 | LOC_Os01g37837 | serine-tRNA ligase | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g10190.1 | LOC_Os03g10190 | serine-tRNA ligase | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g06099 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
MA_10433279g0010 | No alias | Serine--tRNA ligase OS=Helianthus annuus... | 0.03 | OrthoFinder output from all 47 species | |
Mp8g15990.1 | No alias | serine-tRNA ligase | 0.06 | OrthoFinder output from all 47 species | |
Nbi_g05312 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0003.g001588 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g09340 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Smo99251 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g098880.3.1 | Solyc01g098880 | serine-tRNA ligase | 0.05 | OrthoFinder output from all 47 species | |
Spa_g10648 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Tin_g14460 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038788_P002 | Zm00001e038788 | serine-tRNA ligase | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEA | Interproscan |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0004664 | prephenate dehydratase activity | IEP | HCCA |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | HCCA |
MF | GO:0004827 | proline-tRNA ligase activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006558 | L-phenylalanine metabolic process | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | HCCA |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | HCCA |
BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | HCCA |
No external refs found! |