Aliases : FCA
Description : RNA-binding protein BRN1 OS=Arabidopsis thaliana
Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g021978 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aop_g01730 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g28529 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aspi01Gene47874.t1 | RBP-DR1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g03249 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g07629 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Gb_06455 | RBP-DR1, AtRBP-DR1 | RNA-binding protein BRN1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g46820.1 | LOC_Os07g46820 | RNA-binding protein BRN2 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
Ore_g08750 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Pir_g44791 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g13897 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Sam_g37448 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003747 | translation release factor activity | IEP | HCCA |
MF | GO:0004359 | glutaminase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006415 | translational termination | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006553 | lysine metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | HCCA |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009085 | lysine biosynthetic process | IEP | HCCA |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | HCCA |
BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
BP | GO:0030261 | chromosome condensation | IEP | HCCA |
MF | GO:0031369 | translation initiation factor binding | IEP | HCCA |
BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
BP | GO:0042816 | vitamin B6 metabolic process | IEP | HCCA |
BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | HCCA |
BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | HCCA |
BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046184 | aldehyde biosynthetic process | IEP | HCCA |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
No external refs found! |