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  5. GSVIVT01031236001

GSVIVT01031236001 (LON_ARA_ARA, LON1)


Aliases : LON_ARA_ARA, LON1

Description : Protein degradation.peptidase families.serine-type peptidase activities.LON protease


Gene families : OG0001871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031236001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT5G26860 LON_ARA_ARA, LON1 lon protease 1 0.03 OrthoFinder output from all 47 species
Ala_g07227 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13233 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03572 LON2 LON-type protease & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G097000.1 LON_ARA_ARA,... LON-type protease & original description: pacid=50573215... 0.07 OrthoFinder output from all 47 species
Gb_04955 LON_ARA_ARA, LON1 protease (LON) 0.05 OrthoFinder output from all 47 species
LOC_Os07g48960.1 LON_ARA_ARA,... protease (LON) 0.03 OrthoFinder output from all 47 species
Lfl_g09673 LON_ARA_ARA, LON1 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434689g0010 LON_ARA_ARA, LON1 Lon protease homolog, mitochondrial OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Mp1g25680.1 LON_ARA_ARA, LON1 protease (LON) 0.03 OrthoFinder output from all 47 species
Mp1g25690.1 No alias Lon protease homolog, mitochondrial OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Solyc10g024320.2.1 LON_ARA_ARA,... protease (LON) 0.05 OrthoFinder output from all 47 species
Zm00001e011005_P001 LON_ARA_ARA,... protease (LON) 0.03 OrthoFinder output from all 47 species
Zm00001e035924_P002 LON_ARA_ARA,... protease (LON) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008269 Lon_proteolytic 747 951
IPR003111 Lon_prtase_N 101 310
IPR003959 ATPase_AAA_core 463 600
No external refs found!