1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01026499001

GSVIVT01026499001


Description : Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0007997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007997_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026499001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00072250 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.1 OrthoFinder output from all 47 species
AT5G64580 No alias AAA-type ATPase family protein 0.12 OrthoFinder output from all 47 species
Ala_g02523 No alias component *(FtsHi) of protein translocation ATPase motor... 0.03 OrthoFinder output from all 47 species
Als_g11090 No alias component *(FtsHi) of protein translocation ATPase motor... 0.03 OrthoFinder output from all 47 species
Ceric.27G062000.1 Ceric.27G062000 component *(FtsHi) of protein translocation ATPase motor... 0.12 OrthoFinder output from all 47 species
Dde_g08165 No alias component *(FtsHi) of protein translocation ATPase motor... 0.05 OrthoFinder output from all 47 species
Ehy_g20650 No alias component *(FtsHi) of protein translocation ATPase motor... 0.02 OrthoFinder output from all 47 species
Gb_35906 No alias component FtsHi of protein translocation ATPase motor complex 0.05 OrthoFinder output from all 47 species
Len_g04817 No alias component *(FtsHi) of protein translocation ATPase motor... 0.03 OrthoFinder output from all 47 species
Lfl_g08422 No alias component *(FtsHi) of protein translocation ATPase motor... 0.07 OrthoFinder output from all 47 species
Mp8g05580.1 No alias component FtsHi of protein translocation ATPase motor complex 0.13 OrthoFinder output from all 47 species
Nbi_g10216 No alias component *(FtsHi) of protein translocation ATPase motor... 0.06 OrthoFinder output from all 47 species
Ore_g37667 No alias component *(FtsHi) of protein translocation ATPase motor... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018799 No alias component *(FtsHi) of protein translocation ATPase motor... 0.09 OrthoFinder output from all 47 species
Smo142036 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.07 OrthoFinder output from all 47 species
Solyc04g063360.3.1 Solyc04g063360 component FtsHi of protein translocation ATPase motor complex 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 704 838
No external refs found!