1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01021568001

GSVIVT01021568001


Description : Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000216 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021568001
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00135120 PLA-I{beta]2,... Lipid metabolism.lipid degradation.phospholipase... 0.05 OrthoFinder output from all 47 species
AT1G06800 PLA-I{gamma}1 alpha/beta-Hydrolases superfamily protein 0.01 OrthoFinder output from all 47 species
AT1G30370 No alias alpha/beta-Hydrolases superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G51440 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G30550 No alias alpha/beta-Hydrolases superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G31690 No alias alpha/beta-Hydrolases superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G44810 DAD1 alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G16820 PLA-I{beta]2 alpha/beta-Hydrolases superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g045719 No alias phospholipase-A1 *(PC-PLA1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18889 PLA-I{gamma}1 phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08706 PLA-I{gamma}1 phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52185 No alias phospholipase-A1 *(PC-PLA1) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene02236.t1 PLA-I{gamma}1,... phospholipase-A1 *(PC-PLA1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02239.t1 PLA-I{gamma}1,... phospholipase-A1 *(PC-PLA1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09143.t1 Aspi01Gene09143 phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25164.t1 PLA-I{gamma}1,... phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25165.t1 PLA-I{gamma}1,... phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25166.t2 PLA-I{gamma}1,... phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25168.t1 PLA-I{gamma}1,... phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25182.t1 PLA-I{gamma}1,... phospholipase-A1 *(PC-PLA1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25183.t1 PLA-I{gamma}1,... phospholipase-A1 *(PC-PLA1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42905.t1 Aspi01Gene42905 phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42906.t1 Aspi01Gene42906 phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42907.t1 Aspi01Gene42907 phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08320 PLA-I{gamma}1 phospholipase-A1 *(PC-PLA1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45769 PLA-I{gamma}1 phospholipase-A1 *(PC-PLA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G009100.1 Ceric.31G009100 phospholipase-A1 *(PC-PLA1) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g13198 No alias phospholipase-A1 *(PC-PLA1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20150 PLA-I{gamma}1 phospholipase-A1 *(PC-PLA1) & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g11342 No alias phospholipase-A1 *(PC-PLA1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12417 No alias phospholipase-A1 *(PC-PLA1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020725001 No alias Lipid metabolism.lipid degradation.phospholipase... 0.03 OrthoFinder output from all 47 species
GSVIVT01021565001 No alias Lipid metabolism.lipid degradation.phospholipase... 0.07 OrthoFinder output from all 47 species
Gb_16530 No alias phospholipase A1 (PC-PLA1) 0.04 OrthoFinder output from all 47 species
Gb_16609 No alias Phospholipase A1-Igamma3, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_17418 PLA-I{gamma}1 phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
Gb_20645 PLA-I{gamma}1 phospholipase A1 (PC-PLA1) 0.04 OrthoFinder output from all 47 species
Gb_26032 No alias phospholipase A1 (PC-PLA1) 0.01 OrthoFinder output from all 47 species
Gb_30676 PLA-I{gamma}1 phospholipase A1 (PC-PLA1) 0.02 OrthoFinder output from all 47 species
Gb_32647 No alias phospholipase A1 (PC-PLA1) 0.05 OrthoFinder output from all 47 species
Gb_34047 No alias phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
Gb_34048 No alias phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
LOC_Os01g46290.1 LOC_Os01g46290 phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
LOC_Os02g43700.1 PLA-I{beta]2,... phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
LOC_Os11g19290.1 LOC_Os11g19290 phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
MA_10426446g0010 No alias phospholipase A1 (PC-PLA1) 0.02 OrthoFinder output from all 47 species
MA_10429873g0010 No alias phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
MA_10430133g0010 PLA-I{gamma}1 phospholipase A1 (PC-PLA1) 0.04 OrthoFinder output from all 47 species
MA_10430133g0030 No alias phospholipase A1 (PC-PLA1) 0.04 OrthoFinder output from all 47 species
MA_10436267g0010 DAD1 phospholipase A1 (PC-PLA1) 0.04 OrthoFinder output from all 47 species
MA_136227g0010 PLA-I{gamma}1 phospholipase A1 (PC-PLA1) 0.05 OrthoFinder output from all 47 species
MA_159274g0010 PLA-I{gamma}1 Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_166061g0010 No alias phospholipase A1 (PC-PLA1) 0.05 OrthoFinder output from all 47 species
MA_181016g0010 No alias phospholipase A1 (PC-PLA1) 0.02 OrthoFinder output from all 47 species
MA_182729g0010 PLA-I{gamma}1 Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_29794g0010 No alias phospholipase A1 (PC-PLA1) 0.02 OrthoFinder output from all 47 species
MA_390413g0010 PLA-I{beta]2 phospholipase A1 (PC-PLA1) 0.04 OrthoFinder output from all 47 species
MA_6491720g0010 No alias Phospholipase A1-II 1 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
MA_69984g0010 No alias phospholipase A1 (PC-PLA1) 0.02 OrthoFinder output from all 47 species
Mp6g14140.1 PLA-I{gamma}1 phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
Mp8g05150.1 No alias phospholipase A1 (PC-PLA1) 0.02 OrthoFinder output from all 47 species
Msp_g24981 No alias phospholipase-A1 *(PC-PLA1) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40012 No alias phospholipase-A1 *(PC-PLA1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42695 No alias phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10013 No alias phospholipase-A1 *(PC-PLA1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18956 No alias phospholipase-A1 *(PC-PLA1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026011 No alias not classified & original description: CDS=1-942 0.03 OrthoFinder output from all 47 species
Smo113737 No alias Lipid metabolism.lipid degradation.phospholipase... 0.02 OrthoFinder output from all 47 species
Solyc02g014470.4.1 Solyc02g014470 phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
Solyc02g077000.3.1 Solyc02g077000 phospholipase A1 (PC-PLA1) 0.05 OrthoFinder output from all 47 species
Solyc02g077100.3.1 Solyc02g077100 phospholipase A1 (PC-PLA1) 0.02 OrthoFinder output from all 47 species
Solyc02g077160.3.1 Solyc02g077160 phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
Solyc05g053910.1.1 DAD1, Solyc05g053910 phospholipase A1 (PC-PLA1). PLA1-type phospholipase A (DAD1) 0.03 OrthoFinder output from all 47 species
Solyc05g053920.1.1 DAD1, Solyc05g053920 phospholipase A1 (PC-PLA1). PLA1-type phospholipase A (DAD1) 0.02 OrthoFinder output from all 47 species
Solyc06g060870.1.1 PLA-I{beta]2,... phospholipase A1 (PC-PLA1) 0.05 OrthoFinder output from all 47 species
Solyc08g007225.1.1 PLA-I{beta]2,... phospholipase A1 (PC-PLA1) 0.03 OrthoFinder output from all 47 species
Solyc09g065890.4.1 Solyc09g065890 phospholipase A1 (PC-PLA1) 0.02 OrthoFinder output from all 47 species
Zm00001e015304_P001 PLA-I{beta]2,... phospholipase A1 (PC-PLA1) 0.06 OrthoFinder output from all 47 species
Zm00001e027192_P001 PLA-I{gamma}1,... phospholipase A1 (PC-PLA1) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 22 160
No external refs found!