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No description available
Gene families : OG0004400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004400_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01021009001 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00271990 | evm_27.TU.AmTr_v1... | No description available | 0.08 | OrthoFinder output from all 47 species | |
| AT4G30990 | No alias | ARM repeat superfamily protein | 0.11 | OrthoFinder output from all 47 species | |
| Adi_g012035 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g15020 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g14333 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g18323 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene21755.t1 | Aspi01Gene21755 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene21756.t1 | Aspi01Gene21756 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0105.g044994 | No alias | not classified & original description: CDS=23-8209 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33672 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G030600.1 | Ceric.31G030600 | not classified & original description: pacid=50574249... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000137.1 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cre10.g461000 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g14664 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g13106 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g03006 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os01g40250.1 | LOC_Os01g40250 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| MA_10428483g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10434978g0020 | No alias | Acidic leucine-rich nuclear phosphoprotein 32-related... | 0.02 | OrthoFinder output from all 47 species | |
| MA_131618g0010 | No alias | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| MA_51913g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Mp4g16100.1 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g17460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo444016 | No alias | No description available | 0.09 | OrthoFinder output from all 47 species | |
| Solyc09g092240.3.1 | Solyc09g092240 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g27076 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e016650_P001 | Zm00001e016650 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011430 | UTP20_N | 868 | 1476 |
| No external refs found! |