1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01020788001

GSVIVT01020788001


Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatA component


Gene families : OG0005328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005328_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020788001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT3G25660 No alias Amidase family protein 0.06 OrthoFinder output from all 47 species
Aev_g09867 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Als_g27327 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Aop_g13372 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Azfi_s0485.g073411 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Cba_g08123 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ceric.09G091800.1 Ceric.09G091800 component *(GatA) of glutamyl-tRNA-dependent... 0.07 OrthoFinder output from all 47 species
Cre10.g439400 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
Dde_g08150 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ehy_g32347 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
LOC_Os04g55050.1 LOC_Os04g55050 component GatA of glutamyl-tRNA-dependent... 0.08 OrthoFinder output from all 47 species
Len_g23600 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Lfl_g08069 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
MA_10436166g0010 No alias component GatA of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Mp1g01690.1 No alias component GatA of glutamyl-tRNA-dependent... 0.08 OrthoFinder output from all 47 species
Msp_g43744 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Ore_g28904 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ppi_g10248 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Sam_g39506 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
Sam_g51291 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Smo440512 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Solyc10g007840.3.1 Solyc10g007840 component GatA of glutamyl-tRNA-dependent... 0.09 OrthoFinder output from all 47 species
Spa_g12039 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Zm00001e006778_P003 Zm00001e006778 component GatA of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023631 Amidase_dom 70 520
No external refs found!