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  5. GSVIVT01019995001

GSVIVT01019995001


No description available


Gene families : OG0004726 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004726_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019995001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00259870 evm_27.TU.AmTr_v1... No description available 0.09 OrthoFinder output from all 47 species
AMTR_s00101p00054450 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00101p00054740 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Aev_g13283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11122 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0373.g067177 No alias not classified & original description: CDS=557-1150 0.03 OrthoFinder output from all 47 species
Cba_g16828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre06.g310050 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_30141 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g33900.1 LOC_Os08g33900 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os09g24670.1 LOC_Os09g24670 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g21465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g15690.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g32008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19730 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g07396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g007500.4.1 Solyc05g007500 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e034110_P001 Zm00001e034110 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003675 Rce1-like 224 306
No external refs found!