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  5. GSVIVT01018206001

GSVIVT01018206001


Description : Protein degradation.peptidase families.metallopeptidase activities.Matrixin-type metalloprotease


Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018206001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00201730 MMP,... Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
AT1G24140 No alias Matrixin family protein 0.03 OrthoFinder output from all 47 species
AT1G59970 No alias Matrixin family protein 0.03 OrthoFinder output from all 47 species
AT1G70170 MMP matrix metalloproteinase 0.04 OrthoFinder output from all 47 species
AT4G16640 No alias Matrixin family protein 0.04 OrthoFinder output from all 47 species
Azfi_s0187.g056745 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ehy_g30544 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01020151001 MMP Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
GSVIVT01032544001 No alias Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
LOC_Os06g13180.1 MMP, LOC_Os06g13180 Matrixin-type metalloprotease 0.06 OrthoFinder output from all 47 species
LOC_Os10g40830.1 LOC_Os10g40830 Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
Pir_g41391 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Solyc04g005040.1.1 Solyc04g005040 Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
Solyc04g005050.1.1 Solyc04g005050 Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
Spa_g49383 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e036059_P001 MMP, Zm00001e036059 Matrixin-type metalloprotease 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 63 118
IPR001818 Pept_M10_metallopeptidase 154 309
No external refs found!