GSVIVT01010595001 (AT-HSFB2A, HSFB2A)

Aliases : AT-HSFB2A, HSFB2A

Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01010595001

Target	Alias	Description	ECC score	Gene Family Method
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.04	OrthoFinder output from all 47 species
Aev_g05464	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g21078	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g49746	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g17412	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g26939	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Gb_14573	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os06g36930.1	AT-HSFA7A,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
LOC_Os10g28340.1	AT-HSFA6B,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Nbi_g14896	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g53281	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e003755_P002	AT-HSFB2A,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e004752_P001	AT-HSFA6B,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e024268_P001	AT-HSFB2A,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e037165_P002	AT-HSFA7A,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e037244_P001	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Zm00001e041441_P001	AT-HSFB2A,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	21	110

External Links

No external refs found!

GSVIVT01010595001 (AT-HSFB2A, HSFB2A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation