Aliases : AGL9, SEP3
Description : RNA biosynthesis.transcriptional activation.MADS box transcription factor
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00013p00103080 | AGL9, SEP3,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00140p00045380 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
AT1G24260 | AGL9, SEP3 | K-box region and MADS-box transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
AT1G77950 | AGL67 | AGAMOUS-like 67 | 0.03 | OrthoFinder output from all 47 species | |
AT2G42830 | SHP2, AGL5 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G02310 | AGL4, SEP2 | K-box region and MADS-box transcription factor family protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G58780 | AGL1, SHP1 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G15800 | AGL2, SEP1 | K-box region and MADS-box transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g026151 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g06477 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g44649 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g51470 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g04227 | AGL18 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g32969 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aspi01Gene19451.t1 | SOC1, AGL20,... | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.12G051800.1 | GL19, AGL19,... | MADS/AGL-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.16G027500.1 | AGL16, Ceric.16G027500 | MADS/AGL-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01009171001 | SVP, AGL22 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012250001 | AGL7, AP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01038474001 | AGL16 | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os03g54170.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g43740.1 | AGL65, LOC_Os11g43740 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
MA_576145g0010 | GL19, AGL19 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Ore_g44138 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g25344 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pp3c16_19170V3.1 | AGL61, DIA, Pp3c16_19170 | AGAMOUS-like 61 | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g04968 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g08457 | ANR1, AGL44 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0271.g027022 | AGL7, AP1 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g080785.1.1 | AGL61, DIA,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g092950.3.1 | SOC1, AGL20,... | MADS-box protein SOC1 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
Solyc01g093960.3.1 | AGL6, Solyc01g093960 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g091550.2.1 | AGL21, Solyc02g091550 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g012020.4.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g059970.4.1 | PI, Solyc06g059970 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g069430.3.1 | AGL8, FUL, Solyc06g069430 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g22852 | AGL65 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g11248 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e010125_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0004177 | aminopeptidase activity | IEP | HCCA |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
MF | GO:0030145 | manganese ion binding | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
No external refs found! |