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  5. GSVIVT01009356001

GSVIVT01009356001


No description available


Gene families : OG0006058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009356001
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Aev_g13641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33199 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g56000.1 LOC_Os01g56000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g28464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427717g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10431539g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g13220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07631 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g077940.4.1 Solyc04g077940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019718_P003 Zm00001e019718 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 522 578
IPR012921 SPOC_C 926 1069
No external refs found!