GSVIVT01008851001 (HEMB1)

Aliases : HEMB1

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase

Gene families : OG0006175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006175_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01008851001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00259220	HEMB1,...	Coenzyme metabolism.tetrapyrrol...	0.06	OrthoFinder output from all 47 species
AT1G69740	HEMB1	Aldolase superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g020743	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g07164	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g06542	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g09956	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene27653.t1	HEMB1, Aspi01Gene27653	EC_4.2 carbon-oxygen lyase & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0077.g037965	HEMB1	EC_4.2 carbon-oxygen lyase & original description: CDS=83-1387	0.06	OrthoFinder output from all 47 species
Ceric.20G017900.1	HEMB1, Ceric.20G017900	EC_4.2 carbon-oxygen lyase & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001154.8	HEMB1	Coenzyme metabolism.tetrapyrrol...	0.11	OrthoFinder output from all 47 species
Cre02.g091050	HEMB1	Coenzyme metabolism.tetrapyrrol...	0.13	OrthoFinder output from all 47 species
Gb_13789	HEMB1	porphobilinogen synthase	0.04	OrthoFinder output from all 47 species
Len_g21693	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.03	OrthoFinder output from all 47 species
Mp1g22820.1	HEMB1	porphobilinogen synthase	0.2	OrthoFinder output from all 47 species
Msp_g29344	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g05454	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g06304	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g23811	No alias	EC_4.2 carbon-oxygen lyase & original description: none	0.06	OrthoFinder output from all 47 species
Solyc08g069030.4.1	HEMB1, Solyc08g069030	porphobilinogen synthase	0.07	OrthoFinder output from all 47 species
Zm00001e013205_P001	HEMB1, Zm00001e013205	porphobilinogen synthase	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004655	porphobilinogen synthase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001731	ALAD	106	423

External Links

No external refs found!

GSVIVT01008851001 (HEMB1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation