No description available
Gene families : OG0003321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003321_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01008079001 | |
Cluster | HCCA: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00086p00132870 | evm_27.TU.AmTr_v1... | No description available | 0.1 | OrthoFinder output from all 47 species | |
AT3G47890 | No alias | Ubiquitin carboxyl-terminal hydrolase-related protein | 0.14 | OrthoFinder output from all 47 species | |
AT3G47910 | No alias | Ubiquitin carboxyl-terminal hydrolase-related protein | 0.18 | OrthoFinder output from all 47 species | |
Adi_g058350 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g080721 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aev_g14795 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Ala_g04590 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Als_g06801 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g18753 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Als_g19280 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g32535 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aob_g22460 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Aop_g14015 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene09610.t1 | Aspi01Gene09610 | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Azfi_s0327.g065237 | No alias | not classified & original description: CDS=1-5397 | 0.06 | OrthoFinder output from all 47 species | |
Ceric.1Z194000.1 | Ceric.1Z194000 | not classified & original description: pacid=50618972... | 0.1 | OrthoFinder output from all 47 species | |
Cre12.g508250 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
Dac_g28933 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g04153 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Dde_g07008 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Ehy_g16619 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os03g06950.1 | LOC_Os03g06950 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
Len_g49533 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g12618 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
MA_46922g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Msp_g13542 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g05015 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g44266 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ppi_g13760 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0022.g008734 | No alias | not classified & original description: CDS=269-5383 | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g071120.3.1 | Solyc06g071120 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
Spa_g25851 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g50989 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g02198 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e039017_P003 | Zm00001e039017 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016579 | protein deubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
No external refs found! |