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  5. Solyc11g066870.3.1

Solyc11g066870.3.1 (emb1211, Solyc11g066870)


Aliases : emb1211, Solyc11g066870

Description : component Tic100 of inner envelope TIC-20 complex


Gene families : OG0006970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g066870.3.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00213060 emb1211,... Protein translocation.chloroplast.inner envelope TIC... 0.1 OrthoFinder output from all 47 species
AT5G22640 emb1211 MORN (Membrane Occupation and Recognition Nexus)... 0.12 OrthoFinder output from all 47 species
Adi_g076606 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Aev_g01461 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.04 OrthoFinder output from all 47 species
Aob_g08442 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0155.g053661 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.07 OrthoFinder output from all 47 species
Ceric.28G005300.1 emb1211, Ceric.28G005300 component *(Tic100) of inner envelope TIC-20 complex &... 0.07 OrthoFinder output from all 47 species
Dcu_g01823 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Dde_g31810 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.04 OrthoFinder output from all 47 species
Ehy_g06134 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01031401001 emb1211 Protein translocation.chloroplast.inner envelope TIC... 0.09 OrthoFinder output from all 47 species
Gb_21241 emb1211 component Tic100 of inner envelope TIC-20 complex 0.05 OrthoFinder output from all 47 species
Lfl_g03396 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.07 OrthoFinder output from all 47 species
Mp2g06920.1 emb1211 component Tic100 of inner envelope TIC-20 complex 0.14 OrthoFinder output from all 47 species
Ore_g41461 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003828 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Sam_g04959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28255 No alias component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003409 MORN 249 263
IPR003409 MORN 225 241
IPR003409 MORN 343 358
No external refs found!