1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g031970.2.1

Solyc11g031970.2.1 (Solyc11g031970)


Aliases : Solyc11g031970

Description : no hits & (original description: none)


Gene families : OG0007909 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007909_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g031970.2.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g02232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G038200.1 Ceric.26G038200 not classified & original description: pacid=50599985... 0.03 OrthoFinder output from all 47 species
Msp_g48693 ACP1, ACP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 58 102
No external refs found!