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Aliases : Solyc10g080040
Description : ribonuclease (RNC1)
Gene families : OG0004387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004387_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc10g080040.3.1 | |
| Cluster | HCCA: Cluster_133 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G37510 | No alias | Ribonuclease III family protein | 0.18 | OrthoFinder output from all 47 species | |
| Adi_g051860 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g04775 | No alias | ribonuclease *(RNC1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08305 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000334 | No alias | ribonuclease *(RNC1) & original description: CDS=41-2044 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g08197 | No alias | ribonuclease *(RNC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G005400.1 | Ceric.37G005400 | ribonuclease *(RNC1) & original description:... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g14710 | No alias | ribonuclease *(RNC1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g30224 | No alias | ribonuclease *(RNC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000148001 | No alias | RNA processing.organelle machineries.RNA... | 0.19 | OrthoFinder output from all 47 species | |
| LOC_Os01g59510.1 | LOC_Os01g59510 | ribonuclease (RNC1) | 0.06 | OrthoFinder output from all 47 species | |
| Len_g38817 | No alias | ribonuclease *(RNC1) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_10436489g0010 | No alias | ribonuclease (RNC1) | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g04540.1 | No alias | ribonuclease (RNC1) | 0.12 | OrthoFinder output from all 47 species | |
| Msp_g10524 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g17999 | No alias | ribonuclease *(RNC1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g18587 | No alias | ribonuclease *(RNC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17066 | No alias | ribonuclease *(RNC1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g13115 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g14760 | No alias | ribonuclease *(RNC1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22190 | No alias | ribonuclease *(RNC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019511_P001 | Zm00001e019511 | ribonuclease (RNC1) | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |