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  5. Solyc09g013100.3.1

Solyc09g013100.3.1 (Solyc09g013100)


Aliases : Solyc09g013100

Description : component Tic56 of inner envelope TIC-20 complex


Gene families : OG0007576 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007576_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g013100.3.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00064050 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
AT5G01590 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.17 OrthoFinder output from all 47 species
Aev_g00940 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.02 OrthoFinder output from all 47 species
Aob_g17740 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.05 OrthoFinder output from all 47 species
Aop_g11610 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014908 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.04 OrthoFinder output from all 47 species
Ceric.26G055700.1 Ceric.26G055700 component *(Tic56) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Cre17.g727100 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
Dcu_g03676 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.08 OrthoFinder output from all 47 species
MA_10436257g0010 No alias component Tic56 of inner envelope TIC-20 complex 0.02 OrthoFinder output from all 47 species
Mp7g04260.1 No alias component Tic56 of inner envelope TIC-20 complex 0.13 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011825 No alias component *(Tic56) of inner envelope TIC-20 complex &... 0.02 OrthoFinder output from all 47 species
Smo76814 No alias Protein translocation.chloroplast.inner envelope TIC... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025640 GYF_2 235 285
No external refs found!