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  5. Solyc04g051830.4.1

Solyc04g051830.4.1 (Solyc04g051830)


Aliases : Solyc04g051830

Description : Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana (sp|q9sva6|drg3_arath : 621.0)


Gene families : OG0001761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g051830.4.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00071330 evm_27.TU.AmTr_v1... Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ceric.24G065500.1 Ceric.24G065500 not classified & original description: pacid=50629763... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.31 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre01.g058886 No alias Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre06.g252450 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_16052 No alias Developmentally-regulated G-protein 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_115530g0010 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Mp3g16620.1 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g09811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06485 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e035606_P001 Zm00001e035606 Developmentally-regulated G-protein 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 66 158
IPR031662 GTP-binding_2 186 291
IPR004095 TGS 293 366
No external refs found!