Solyc03g007330.3.1 (FTSH11, Solyc03g007330)

Aliases : FTSH11, Solyc03g007330

Description : component FtsH4|11 of FtsH mitochondrial protease complexes

Gene families : OG0001340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001340_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g007330.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00107p00109770	FTSH11,...	Protein degradation.peptidase families.metallopeptidase...	0.04	OrthoFinder output from all 47 species
AT5G53170	FTSH11	FTSH protease 11	0.03	OrthoFinder output from all 47 species
Adi_g025495	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Ala_g08447	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.06	OrthoFinder output from all 47 species
Als_g52491	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene70934.t1	ftsh4, Aspi01Gene70934	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0064.g035605	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.04	OrthoFinder output from all 47 species
Cba_g25307	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Ceric.12G016700.1	ftsh4, Ceric.12G016700	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Ceric.36G065900.1	FTSH11, Ceric.36G065900	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.06	OrthoFinder output from all 47 species
Cre14.g625625	FTSH11	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Dac_g14565	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g04103	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.06	OrthoFinder output from all 47 species
Dde_g05355	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Dde_g07450	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g14643	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Gb_20184	FTSH11	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.06	OrthoFinder output from all 47 species
LOC_Os01g43150.1	FTSH11, LOC_Os01g43150	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.06	OrthoFinder output from all 47 species
Len_g03868	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Len_g13306	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Pir_g02841	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Sam_g15257	No alias	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Sam_g29548	No alias	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Spa_g16971	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Tin_g14314	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e020443_P001	FTSH11, Zm00001e020443	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.04	OrthoFinder output from all 47 species
Zm00001e027886_P001	FTSH11, Zm00001e027886	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004827	proline-tRNA ligase activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006771	riboflavin metabolic process	IEP	HCCA
MF	GO:0008184	glycogen phosphorylase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009231	riboflavin biosynthetic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042726	flavin-containing compound metabolic process	IEP	HCCA
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	399	527
IPR041569	AAA_lid_3	550	590
IPR000642	Peptidase_M41	609	784

External Links

No external refs found!

Solyc03g007330.3.1 (FTSH11, Solyc03g007330)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation