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  5. Solyc01g080810.3.1

Solyc01g080810.3.1 (OVA2, Solyc01g080810)


Aliases : OVA2, Solyc01g080810

Description : isoleucine-tRNA ligase


Gene families : OG0006005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g080810.3.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00205250 OVA2,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.13 OrthoFinder output from all 47 species
AT5G49030 OVA2 tRNA synthetase class I (I, L, M and V) family protein 0.13 OrthoFinder output from all 47 species
Ala_g12360 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Aob_g14864 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Aop_g07019 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0002.g001403 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Ceric.08G016200.1 OVA2, Ceric.08G016200 EC_6.1 ligase forming carbon-oxygen bond & original... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000630.10 OVA2 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Cre16.g689871 OVA2 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.07 OrthoFinder output from all 47 species
Dac_g01785 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g03490 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017762001 OVA2 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.2 OrthoFinder output from all 47 species
Gb_29585 OVA2 Isoleucine--tRNA ligase, chloroplastic/mitochondrial... 0.02 OrthoFinder output from all 47 species
LOC_Os02g53770.1 OVA2, LOC_Os02g53770 isoleucine-tRNA ligase 0.07 OrthoFinder output from all 47 species
Len_g46605 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.08 OrthoFinder output from all 47 species
Lfl_g15642 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Mp1g26370.1 OVA2 isoleucine-tRNA ligase 0.08 OrthoFinder output from all 47 species
Msp_g13414 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Nbi_g20010 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.07 OrthoFinder output from all 47 species
Pir_g18376 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Ppi_g01373 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Smo437676 OVA2 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
Smo445517 OVA2 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
Tin_g26043 OVA2 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016040_P001 OVA2, Zm00001e016040 isoleucine-tRNA ligase 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 821 985
IPR002300 aa-tRNA-synth_Ia 132 775
No external refs found!