Smo153639

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase

Gene families : OG0003806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003806_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo153639
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00173790	evm_27.TU.AmTr_v1...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
AT4G10320	No alias	tRNA synthetase class I (I, L, M and V) family protein	0.05	OrthoFinder output from all 47 species
Adi_g059090	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Aev_g01566	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Ala_g16638	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Als_g01962	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene48027.t1	Aspi01Gene48027	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0007.g011013	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Cba_g01331	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Ceric.15G036400.1	Ceric.15G036400	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020904.57	No alias	Enzyme classification.EC_6 ligases.EC_6.1 ligase forming...	0.02	OrthoFinder output from all 47 species
Cre16.g651750	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Dcu_g23538	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
Dde_g09176	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Ehy_g01677	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01010735001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
LOC_Os06g43760.1	LOC_Os06g43760	isoleucine-tRNA ligase	0.09	OrthoFinder output from all 47 species
Len_g41130	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
MA_496893g0010	No alias	Isoleucine--tRNA ligase, cytoplasmic OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_901587g0010	No alias	Isoleucine--tRNA ligase, cytoplasmic OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_9912g0010	No alias	Isoleucine--tRNA ligase, cytoplasmic OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Mp6g20330.1	No alias	isoleucine-tRNA ligase	0.06	OrthoFinder output from all 47 species
Ppi_g03990	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011582	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Solyc11g012140.2.1	Solyc11g012140	isoleucine-tRNA ligase	0.05	OrthoFinder output from all 47 species
Spa_g12281	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.08	OrthoFinder output from all 47 species
Zm00001e030455_P003	Zm00001e030455	isoleucine-tRNA ligase	0.06	OrthoFinder output from all 47 species
Zm00001e037466_P001	Zm00001e037466	isoleucine-tRNA ligase	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	HCCA
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002300	aa-tRNA-synth_Ia	19	651

External Links

No external refs found!

Smo153639

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation