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  5. Smo121308

Smo121308


Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase


Gene families : OG0004161 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo121308
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT5G26710 No alias Glutamyl/glutaminyl-tRNA synthetase, class Ic 0.05 OrthoFinder output from all 47 species
Aop_g29671 No alias glutamate-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33282 No alias glutamate-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000378.16 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Cre11.g467547 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Dac_g09913 No alias glutamate-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11897 No alias glutamate-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031353001 No alias Glutamate--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os10g22380.1 LOC_Os10g22380 glutamate-tRNA ligase 0.05 OrthoFinder output from all 47 species
Mp2g10560.1 No alias glutamate-tRNA ligase 0.03 OrthoFinder output from all 47 species
Pp3c25_11910V3.1 Pp3c25_11910 Glutamyl/glutaminyl-tRNA synthetase, class Ic 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR020059 Glu/Gln-tRNA-synth_Ib_codon-bd 531 707
No external refs found!