1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g16160.1

LOC_Os12g16160.1 (LOC_Os12g16160)


Aliases : LOC_Os12g16160

Description : no hits & (original description: none)


Gene families : OG0001446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001446_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g16160.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT3G12890 ASML2 activator of spomin::LUC2 0.06 OrthoFinder output from all 47 species
AT5G59990 No alias CCT motif family protein 0.05 OrthoFinder output from all 47 species
Adi_g081459 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19515 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0052.g031598 No alias not classified & original description: CDS=1-1092 0.03 OrthoFinder output from all 47 species
Dcu_g14890 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17450 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g19568 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g083400.3.1 Solyc03g083400 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 96 138
No external refs found!