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  5. LOC_Os11g37510.1

LOC_Os11g37510.1 (LOC_Os11g37510)


Aliases : LOC_Os11g37510

Description : component mtRPL4 of large ribosomal subunit proteome


Gene families : OG0005986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g37510.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00151570 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
AT2G20060 No alias Ribosomal protein L4/L1 family 0.03 OrthoFinder output from all 47 species
Aev_g01964 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000342.40 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Cre12.g520400 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g15891 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g44796 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01004810001 No alias Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Gb_04540 No alias component mtRPL4 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
MA_10437219g0010 No alias component mtRPL4 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Mp4g00020.1 No alias component mtRPL4 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Nbi_g01874 No alias component *(uL4m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c13_15330V3.1 Pp3c13_15330 Ribosomal protein L4/L1 family 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006510 No alias component *(uL4m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc12g088730.2.1 Solyc12g088730 component mtRPL4 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Zm00001e006048_P001 Zm00001e006048 component mtRPL4 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002136 Ribosomal_L4/L1e 92 278
No external refs found!