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Aliases : CLPR1, SVR2, NCLPP5, LOC_Os05g51450
Description : non-proteolytic core component ClpR of chloroplast Clp-type protease complex
Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00194810 | CLPR4,... | Protein degradation.peptidase families.serine-type... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00045p00207040 | evm_27.TU.AmTr_v1... | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00164p00068000 | CLPR1, SVR2,... | Protein degradation.peptidase families.serine-type... | 0.07 | OrthoFinder output from all 47 species | |
| AT1G49970 | CLPR1, SVR2, NCLPP5 | CLP protease proteolytic subunit 1 | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g074670 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07767 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g11775 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g09550 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g00665 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g01710 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01289 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g02995 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g22566 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g00461 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g23397 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene40533.t1 | CLPR4, Aspi01Gene40533 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g013857 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g025925 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0279.g062250 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15422 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g25400 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G040500.1 | CLPR1, SVR2,... | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.23G012800.1 | Ceric.23G012800 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020952.49 | CLPR4 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03150 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g06754 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g10911 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g11508 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g02711 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g03225 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21817 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g01031 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g02196 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g18668 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01031146001 | No alias | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_12676 | No alias | non-proteolytic core component ClpR of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_40312 | CLPR4 | non-proteolytic core component ClpR of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10203 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g15208 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g01084 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g01473 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10429819g0020 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component ClpR of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g21300.1 | No alias | non-proteolytic core component ClpR of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g18600.1 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component ClpR of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g05047 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g06430 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g04693 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g05257 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g11210 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07323 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12837 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g07357 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g12637 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g09209 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003581 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004018 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007703 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g11367 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16208 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17176 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17177 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g52083 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Smo153292 | No alias | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g099690.3.1 | Solyc01g099690 | non-proteolytic core component ClpR of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g077890.3.1 | CLPR4, Solyc08g077890 | non-proteolytic core component ClpR of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11689 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22875 | CLPR4 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g02598 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e017288_P001 | CLPR4, Zm00001e017288 | non-proteolytic core component ClpR of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032571_P001 | CLPR1, SVR2,... | non-proteolytic core component ClpR of chloroplast... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003747 | translation release factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005779 | obsolete integral component of peroxisomal membrane | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006415 | translational termination | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006536 | glutamate metabolic process | IEP | HCCA |
| BP | GO:0006537 | glutamate biosynthetic process | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015930 | glutamate synthase activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| BP | GO:0016559 | peroxisome fission | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0048285 | organelle fission | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 162 | 344 |
| No external refs found! |