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  5. LOC_Os05g49970.1

LOC_Os05g49970.1 (FUG1, LOC_Os05g49970)


Aliases : FUG1, LOC_Os05g49970

Description : IF-2 translation initiation factor


Gene families : OG0001742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g49970.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00096920 FUG1,... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT1G17220 FUG1 Translation initiation factor 2, small GTP-binding protein 0.13 OrthoFinder output from all 47 species
Adi_g014194 FUG1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g081357 FUG1 translation initiation factor *(IF-2) & original... 0.07 OrthoFinder output from all 47 species
Aev_g05516 FUG1 translation initiation factor *(IF-2) & original... 0.08 OrthoFinder output from all 47 species
Ala_g09740 FUG1 translation initiation factor *(IF-2) & original... 0.06 OrthoFinder output from all 47 species
Als_g14191 FUG1 translation initiation factor *(IF-2) & original... 0.05 OrthoFinder output from all 47 species
Aob_g07966 FUG1 translation initiation factor *(IF-2) & original... 0.08 OrthoFinder output from all 47 species
Aob_g16703 FUG1 translation initiation factor *(IF-2) & original... 0.04 OrthoFinder output from all 47 species
Aop_g43380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g61405 FUG1 translation initiation factor *(IF-2) & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene03760.t1 FUG1, Aspi01Gene03760 translation initiation factor *(IF-2) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0440.g070310 FUG1 translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Cba_g31671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31672 FUG1 translation initiation factor *(IF-2) & original... 0.06 OrthoFinder output from all 47 species
Ceric.23G059100.1 FUG1, Ceric.23G059100 translation initiation factor *(IF-2) & original... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.11 FUG1 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Cre07.g341850 FUG1 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Dac_g04291 FUG1 translation initiation factor *(IF-2) & original... 0.08 OrthoFinder output from all 47 species
Dcu_g05825 FUG1 translation initiation factor *(IF-2) & original... 0.11 OrthoFinder output from all 47 species
Dcu_g09850 No alias translation initiation factor *(IF-2) & original... 0.02 OrthoFinder output from all 47 species
Dde_g26472 FUG1 translation initiation factor *(IF-2) & original... 0.09 OrthoFinder output from all 47 species
Ehy_g07077 FUG1 translation initiation factor *(IF-2) & original... 0.08 OrthoFinder output from all 47 species
GSVIVT01020495001 FUG1 Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
Gb_26690 FUG1 IF-2 translation initiation factor 0.07 OrthoFinder output from all 47 species
Len_g19212 FUG1 translation initiation factor *(IF-2) & original... 0.09 OrthoFinder output from all 47 species
Lfl_g02404 FUG1 translation initiation factor *(IF-2) & original... 0.09 OrthoFinder output from all 47 species
MA_4340g0010 FUG1 IF-2 translation initiation factor 0.06 OrthoFinder output from all 47 species
MA_93993g0010 FUG1 Translation initiation factor IF-2, chloroplastic... 0.04 OrthoFinder output from all 47 species
Mp3g09840.1 FUG1 IF-2 translation initiation factor 0.05 OrthoFinder output from all 47 species
Msp_g16032 FUG1 translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g14053 FUG1 translation initiation factor *(IF-2) & original... 0.1 OrthoFinder output from all 47 species
Ore_g18243 FUG1 translation initiation factor *(IF-2) & original... 0.05 OrthoFinder output from all 47 species
Pir_g03114 FUG1 translation initiation factor *(IF-2) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g13091 FUG1 translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g09075 FUG1 translation initiation factor *(IF-2) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015475 FUG1 translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Sam_g08434 No alias translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Smo148692 FUG1 Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
Solyc07g056020.3.1 FUG1, Solyc07g056020 IF-2 translation initiation factor 0.11 OrthoFinder output from all 47 species
Spa_g57144 FUG1 translation initiation factor *(IF-2) & original... 0.1 OrthoFinder output from all 47 species
Tin_g26294 FUG1 translation initiation factor *(IF-2) & original... 0.1 OrthoFinder output from all 47 species
Zm00001e031527_P002 FUG1, Zm00001e031527 IF-2 translation initiation factor 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 430 590
No external refs found!