Aliases : LOC_Os03g42220
Description : CCT2 subunit beta of CCT chaperonin folding complex
Gene families : OG0005353 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005353_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os03g42220.1 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00149p00026500 | evm_27.TU.AmTr_v1... | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.09 | OrthoFinder output from all 47 species | |
AT5G20890 | No alias | TCP-1/cpn60 chaperonin family protein | 0.19 | OrthoFinder output from all 47 species | |
Adi_g092819 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g14634 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g02199 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0251.g060285 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.02G085300.1 | Ceric.02G085300 | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.09 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020903.30 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.03 | OrthoFinder output from all 47 species | |
Cre09.g416750 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.07 | OrthoFinder output from all 47 species | |
Dac_g00849 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g14728 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.08 | OrthoFinder output from all 47 species | |
Ehy_g02581 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01008708001 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.12 | OrthoFinder output from all 47 species | |
Len_g15421 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.03 | OrthoFinder output from all 47 species | |
MA_10434959g0010 | No alias | CCT2 subunit beta of CCT chaperonin folding complex | 0.08 | OrthoFinder output from all 47 species | |
Mp5g16030.1 | No alias | CCT2 subunit beta of CCT chaperonin folding complex | 0.07 | OrthoFinder output from all 47 species | |
Msp_g24804 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g03110 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.07 | OrthoFinder output from all 47 species | |
Ore_g15486 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g03082 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c6_15940V3.1 | Pp3c6_15940 | TCP-1/cpn60 chaperonin family protein | 0.03 | OrthoFinder output from all 47 species | |
Sam_g12467 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.06 | OrthoFinder output from all 47 species | |
Smo171093 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.06 | OrthoFinder output from all 47 species | |
Solyc11g069000.2.1 | Solyc11g069000 | CCT2 subunit beta of CCT chaperonin folding complex | 0.1 | OrthoFinder output from all 47 species | |
Spa_g11138 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.07 | OrthoFinder output from all 47 species | |
Tin_g02689 | No alias | subunit beta *(CCT2) of CCT chaperonin folding complex &... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e017228_P001 | Zm00001e017228 | CCT2 subunit beta of CCT chaperonin folding complex | 0.16 | OrthoFinder output from all 47 species | |
Zm00001e025595_P002 | Zm00001e025595 | CCT2 subunit beta of CCT chaperonin folding complex | 0.16 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004819 | glutamine-tRNA ligase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005759 | mitochondrial matrix | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006425 | glutaminyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016289 | CoA hydrolase activity | IEP | HCCA |
MF | GO:0016790 | thiolester hydrolase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
CC | GO:0031974 | membrane-enclosed lumen | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043233 | organelle lumen | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
CC | GO:0070013 | intracellular organelle lumen | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002423 | Cpn60/GroEL/TCP-1 | 28 | 515 |
No external refs found! |