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  5. LOC_Os03g18510.1

LOC_Os03g18510.1 (LOC_Os03g18510)


Aliases : LOC_Os03g18510

Description : component eIF2-alpha of eIF2 Met-tRNA binding factor complex


Gene families : OG0003497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g18510.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00125300 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
AT5G05470 ATEIF2-A2,... eukaryotic translation initiation factor 2 alpha subunit 0.05 OrthoFinder output from all 47 species
Als_g09888 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Als_g27841 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Als_g61659 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.05 OrthoFinder output from all 47 species
Aob_g07794 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Aop_g13735 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.08 OrthoFinder output from all 47 species
Aspi01Gene63191.t1 Aspi01Gene63191 component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Azfi_s0230.g059165 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.04 OrthoFinder output from all 47 species
Ceric.14G079800.1 Ceric.14G079800 component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Cre12.g490000 No alias Protein biosynthesis.translation... 0.07 OrthoFinder output from all 47 species
Dac_g15381 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.04 OrthoFinder output from all 47 species
Ehy_g08287 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
GSVIVT01032762001 No alias Protein biosynthesis.translation... 0.06 OrthoFinder output from all 47 species
Lfl_g01263 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
MA_10428764g0010 No alias component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species
Mp2g08380.1 No alias component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.1 OrthoFinder output from all 47 species
Pir_g16857 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Pnu_g26776 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Pp3c3_32110V3.1 Pp3c3_32110 Eukaryotic translation initiation factor 2 subunit 1 0.03 OrthoFinder output from all 47 species
Sam_g18135 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.06 OrthoFinder output from all 47 species
Smo267638 No alias Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Solyc03g095840.3.1 Solyc03g095840 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.05 OrthoFinder output from all 47 species
Spa_g07806 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.11 OrthoFinder output from all 47 species
Spa_g25613 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.04 OrthoFinder output from all 47 species
Tin_g01777 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.05 OrthoFinder output from all 47 species
Zm00001e001345_P001 Zm00001e001345 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.02 OrthoFinder output from all 47 species
Zm00001e038398_P001 Zm00001e038398 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 15 88
IPR011488 TIF_2_asu 126 256
No external refs found!