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  5. LOC_Os02g16709.1

LOC_Os02g16709.1 (PLSP1, LOC_Os02g16709)


Aliases : PLSP1, LOC_Os02g16709

Description : plastidic signal peptidase (PLSP/TPP)


Gene families : OG0000723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g16709.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00050280 PLSP1,... Protein modification.peptide maturation.plastid.PLSP/TPP... 0.01 OrthoFinder output from all 47 species
AT3G24590 PLSP1 plastidic type i signal peptidase 1 0.07 OrthoFinder output from all 47 species
Als_g21840 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Aop_g37559 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031335 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.04 OrthoFinder output from all 47 species
Cba_g19010 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.10G075600.1 PLSP1, Ceric.10G075600 plastidic signal peptidase *(PLSP/TPP) & original... 0.05 OrthoFinder output from all 47 species
Cre07.g344350 PLSP1 Protein modification.peptide maturation.plastid.PLSP/TPP... 0.04 OrthoFinder output from all 47 species
Dde_g03414 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g10823 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01015377001 PLSP1 Protein modification.peptide maturation.plastid.PLSP/TPP... 0.07 OrthoFinder output from all 47 species
Gb_36328 PLSP1 plastidic signal peptidase (PLSP/TPP) 0.03 OrthoFinder output from all 47 species
Ore_g19818 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g19357 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g55222 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
Solyc12g007120.2.1 PLSP1, Solyc12g007120 plastidic signal peptidase (PLSP/TPP) 0.11 OrthoFinder output from all 47 species
Tin_g15463 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e014232_P002 PLSP1, Zm00001e014232 plastidic signal peptidase (PLSP/TPP) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR019533 Peptidase_S26 165 263
No external refs found!