LOC_Os01g03040.1 (LOC_Os01g03040)


Aliases : LOC_Os01g03040

Description : no hits & (original description: none)


Gene families : OG0007070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007070_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g03040.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT1G18060 No alias unknown protein; INVOLVED IN: biological_process... 0.15 OrthoFinder output from all 47 species
Adi_g018448 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g00859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g013906 No alias not classified & original description: CDS=121-993 0.03 OrthoFinder output from all 47 species
Cba_g74299 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ceric.18G038300.1 Ceric.18G038300 not classified & original description: pacid=50621845... 0.03 OrthoFinder output from all 47 species
Dcu_g11719 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ehy_g00630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008377001 No alias No description available 0.09 OrthoFinder output from all 47 species
Gb_12397 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g04631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_28211g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g19850.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g10918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26689 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g26979 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c8_21790V3.1 Pp3c8_21790 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g14348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo109814 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo270821 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc06g069030.3.1 Solyc06g069030 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!