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  5. MA_15038g0010

MA_15038g0010 (HVE, TIP120, CAND1,...)


Aliases : HVE, TIP120, CAND1, ATCAND1, ETA2

Description : adaptor protein exchange factor (CAND1)


Gene families : OG0003255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_15038g0010
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00129340 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Adi_g080625 HVE, TIP120,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087197 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g14845 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.04 OrthoFinder output from all 47 species
Als_g29146 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Als_g29147 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.05 OrthoFinder output from all 47 species
Aob_g12797 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Aop_g10560 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene20614.t1 HVE, TIP120,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001330 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.39 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cre03.g177053 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 OrthoFinder output from all 47 species
Dcu_g04133 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01023143001 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_04165 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.05 OrthoFinder output from all 47 species
LOC_Os02g07120.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.03 OrthoFinder output from all 47 species
Len_g10725 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g08338 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Mp1g02440.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.03 OrthoFinder output from all 47 species
Msp_g13620 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g20444 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g02857 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g26565 No alias adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Smo165037 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.04 OrthoFinder output from all 47 species
Solyc01g103010.4.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.02 OrthoFinder output from all 47 species
Spa_g15706 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Spa_g26194 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Tin_g01276 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e025157_P002 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013932 TATA-bd_TIP120 1032 1195
No external refs found!