Aliases : EMB2761
Description : Threonine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana (sp|f4ifc5|sytm2_arath : 311.0) & Enzyme classification.EC_6 ligases.EC_6.1 ligase forming carbon-oxygen bond(50.6.1 : 105.9)
Gene families : OG0001675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001675_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_10435490g0010 | |
Cluster | HCCA: Cluster_128 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00055p00165940 | EMB2761,... | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.07 | OrthoFinder output from all 47 species | |
AT2G04842 | EMB2761 | threonyl-tRNA synthetase, putative / threonine--tRNA... | 0.05 | OrthoFinder output from all 47 species | |
Aev_g03332 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g26881 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.1 | OrthoFinder output from all 47 species | |
Als_g18047 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Aob_g32600 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Aop_g02242 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.08 | OrthoFinder output from all 47 species | |
Azfi_s0006.g010354 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g26634 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.13G064700.1 | EMB2761, Ceric.13G064700 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000169.10 | EMB2761 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.01 | OrthoFinder output from all 47 species | |
Cre06.g273300 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | OrthoFinder output from all 47 species | |
Cre10.g421600 | EMB2761 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g13016 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g12871 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g18743 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Gb_06729 | EMB2761 | threonine-tRNA ligase | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os02g33500.1 | EMB2761, LOC_Os02g33500 | threonine-tRNA ligase | 0.04 | OrthoFinder output from all 47 species | |
Len_g00719 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g02039 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Mp1g09670.1 | EMB2761 | threonine-tRNA ligase | 0.04 | OrthoFinder output from all 47 species | |
Msp_g25058 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g42103 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Ore_g05959 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g17574 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g08690 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g14903 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g048080.4.1 | EMB2761, Solyc07g048080 | threonine-tRNA ligase | 0.05 | OrthoFinder output from all 47 species | |
Spa_g12675 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.1 | OrthoFinder output from all 47 species | |
Tin_g29689 | EMB2761 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e035402_P001 | EMB2761, Zm00001e035402 | threonine-tRNA ligase | 0.1 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0043039 | tRNA aminoacylation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR012947 | tRNA_SAD | 197 | 249 |
No external refs found! |