Description : Polygalacturonase OS=Cryptomeria japonica (sp|p43212|pglr2_cryja : 174.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 107.9)
Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00104p00026540 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.02 | OrthoFinder output from all 47 species | |
AT4G01890 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g057212 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g37061 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene44829.t1 | Aspi01Gene44829 | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g19170.1 | LOC_Os01g19170 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g59330.1 | ADPG2, PGAZAT,... | polygalacturonase (QRT2) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g46510.1 | LOC_Os05g46510 | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g64037 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g025440.3.1 | Solyc04g025440 | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g015870.4.1 | Solyc07g015870 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g014560.3.1 | Solyc08g014560 | Polygalacturonase OS=Prunus persica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026240_P001 | Zm00001e026240 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000976 | transcription cis-regulatory region binding | IEP | HCCA |
MF | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | IEP | HCCA |
MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0007034 | vacuolar transport | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015297 | antiporter activity | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0032422 | purine-rich negative regulatory element binding | IEP | HCCA |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 213 | 347 |
No external refs found! |