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  5. MA_10429833g0010

MA_10429833g0010 (CCB1)


Aliases : CCB1

Description : assembly factor CCB1 of CCB cytochrome b6 maturation system (system IV)


Gene families : OG0006907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429833g0010
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00074040 CCB1,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
AT3G26710 CCB1 cofactor assembly of complex C 0.08 OrthoFinder output from all 47 species
Aev_g08263 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Ala_g12011 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Als_g54717 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Aob_g20691 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Azfi_s0436.g069940 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.06 OrthoFinder output from all 47 species
Cba_g10743 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.07 OrthoFinder output from all 47 species
Ceric.22G072900.1 CCB1, Ceric.22G072900 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.06 OrthoFinder output from all 47 species
Cre16.g662150 CCB1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.09 OrthoFinder output from all 47 species
Dac_g22896 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.06 OrthoFinder output from all 47 species
Dcu_g02462 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Ehy_g22554 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.09 OrthoFinder output from all 47 species
GSVIVT01032980001 CCB1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.08 OrthoFinder output from all 47 species
Gb_25718 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
LOC_Os11g32320.1 CCB1, LOC_Os11g32320 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Len_g01063 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.09 OrthoFinder output from all 47 species
Lfl_g35581 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Mp4g15480.1 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Nbi_g14152 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Ore_g11194 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.07 OrthoFinder output from all 47 species
Pir_g15644 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.09 OrthoFinder output from all 47 species
Pnu_g07222 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009830 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Sam_g18985 No alias assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Sam_g18986 No alias assembly factor CCB1 of CCB cytochrome b6 maturation... 0.06 OrthoFinder output from all 47 species
Spa_g05565 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.09 OrthoFinder output from all 47 species
Tin_g24718 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR021919 CCB1 88 254
No external refs found!