Mp8g07720.1

Description : subunit beta of phenylalanine-tRNA ligase complex

Gene families : OG0005200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005200_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp8g07720.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00195200	evm_27.TU.AmTr_v1...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
Adi_g059052	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.02	OrthoFinder output from all 47 species
Aev_g05341	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.04	OrthoFinder output from all 47 species
Aop_g14148	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.05	OrthoFinder output from all 47 species
Azfi_s0032.g024823	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.07	OrthoFinder output from all 47 species
Ceric.07G036000.1	Ceric.07G036000	subunit beta of phenylalanine-tRNA ligase complex &...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021464.35	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
Cre13.g603900	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.08	OrthoFinder output from all 47 species
Dcu_g04791	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.02	OrthoFinder output from all 47 species
Dde_g05886	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.01	OrthoFinder output from all 47 species
GSVIVT01008188001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
Gb_05062	No alias	subunit beta of phenylalanine-tRNA ligase complex	0.04	OrthoFinder output from all 47 species
LOC_Os05g48510.1	LOC_Os05g48510	subunit beta of phenylalanine-tRNA ligase complex	0.07	OrthoFinder output from all 47 species
Lfl_g10407	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.03	OrthoFinder output from all 47 species
MA_492000g0010	No alias	Phenylalanine--tRNA ligase beta subunit, cytoplasmic...	0.02	OrthoFinder output from all 47 species
Nbi_g01273	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.01	OrthoFinder output from all 47 species
Ppi_g14467	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.01	OrthoFinder output from all 47 species
Sam_g10046	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.02	OrthoFinder output from all 47 species
Solyc01g008310.4.1	Solyc01g008310	subunit beta of phenylalanine-tRNA ligase complex	0.04	OrthoFinder output from all 47 species
Spa_g30088	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.05	OrthoFinder output from all 47 species
Tin_g02009	No alias	subunit beta of phenylalanine-tRNA ligase complex &...	0.02	OrthoFinder output from all 47 species
Zm00001e029739_P002	Zm00001e029739	subunit beta of phenylalanine-tRNA ligase complex	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000287	magnesium ion binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	None	Extended
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	None	Extended
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0004637	phosphoribosylamine-glycine ligase activity	IEP	HCCA
MF	GO:0004814	arginine-tRNA ligase activity	IEP	HCCA
MF	GO:0005047	signal recognition particle binding	IEP	HCCA
MF	GO:0005048	signal sequence binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	HCCA
BP	GO:0006144	purine nucleobase metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
BP	GO:0046112	nucleobase biosynthetic process	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR040659	PhetRS_B1	1	92
IPR005146	B3/B4_tRNA-bd	121	281
IPR005147	tRNA_synthase_B5-dom	310	378
IPR041616	PheRS_beta_core	381	590

External Links

No external refs found!

Mp8g07720.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation