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  5. Mp7g18200.1

Mp7g18200.1 (GCN3, ATGCN3)


Aliases : GCN3, ATGCN3

Description : ABC transporter F family member 3 OS=Arabidopsis thaliana (sp|q8h0v6|ab3f_arath : 978.0)


Gene families : OG0006468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g18200.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00263550 GCN3, ATGCN3,... ABC transporter F family member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G64550 GCN3, ATGCN3 general control non-repressible 3 0.1 OrthoFinder output from all 47 species
Aev_g18277 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.01 OrthoFinder output from all 47 species
Ala_g02506 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04646.t1 GCN3, ATGCN3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02053 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.98 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Cre11.g478128 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dde_g21674 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.04 OrthoFinder output from all 47 species
GSVIVT01019609001 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g58020.1 GCN3, ATGCN3,... ABC transporter F family member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g02885 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.02 OrthoFinder output from all 47 species
MA_10435195g0010 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_8312073g0010 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Pnu_g06806 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.02 OrthoFinder output from all 47 species
Smo175495 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g04523 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.02 OrthoFinder output from all 47 species
Tin_g02806 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.02 OrthoFinder output from all 47 species
Zm00001e016263_P001 GCN3, ATGCN3,... ABC transporter F family member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 549 679
IPR032781 ABC_tran_Xtn 435 516
IPR003439 ABC_transporter-like_ATP-bd 194 396
No external refs found!