1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp6g20740.1

Mp6g20740.1 (MURE, PDE316, ATMURE)


Aliases : MURE, PDE316, ATMURE

Description : PAP11/MURE cofactor of plastid-encoded RNA polymerase


Gene families : OG0004194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004194_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g20740.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00236210 MURE, PDE316,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.07 OrthoFinder output from all 47 species
AT1G63680 MURE, PDE316, ATMURE acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.15 OrthoFinder output from all 47 species
Als_g09620 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 OrthoFinder output from all 47 species
Aop_g11920 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011499 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 OrthoFinder output from all 47 species
Cba_g03909 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.03 OrthoFinder output from all 47 species
Ceric.37G004600.1 MURE, PDE316,... cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.16 OrthoFinder output from all 47 species
Cre12.g519900 MURE, PDE316, ATMURE RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species
Dac_g02352 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.03 OrthoFinder output from all 47 species
Ehy_g03961 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.02 OrthoFinder output from all 47 species
GSVIVT01019746001 MURE, PDE316, ATMURE RNA biosynthesis.organelle machineries.RNA polymerase... 0.08 OrthoFinder output from all 47 species
Lfl_g03366 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.03 OrthoFinder output from all 47 species
MA_961480g0010 MURE, PDE316, ATMURE PAP11/MURE cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Nbi_g02324 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.02 OrthoFinder output from all 47 species
Nbi_g12757 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.02 OrthoFinder output from all 47 species
Ore_g33830 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.04 OrthoFinder output from all 47 species
Pir_g16747 MURE, PDE316, ATMURE cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.02 OrthoFinder output from all 47 species
Pp3c24_18820V3.1 MURE, PDE316,... acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.02 OrthoFinder output from all 47 species
Sam_g23643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51453 No alias cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... 0.03 OrthoFinder output from all 47 species
Solyc08g081170.4.1 MURE, PDE316,... PAP11/MURE cofactor of plastid-encoded RNA polymerase 0.06 OrthoFinder output from all 47 species
Zm00001e037912_P001 MURE, PDE316,... PAP11/MURE cofactor of plastid-encoded RNA polymerase 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016874 ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006166 purine ribonucleoside salvage IEP HCCA
BP GO:0006190 inosine salvage IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009163 nucleoside biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP HCCA
BP GO:0042278 purine nucleoside metabolic process IEP HCCA
BP GO:0042451 purine nucleoside biosynthetic process IEP HCCA
BP GO:0042455 ribonucleoside biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
BP GO:0043174 nucleoside salvage IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046102 inosine metabolic process IEP HCCA
BP GO:0046103 inosine biosynthetic process IEP HCCA
BP GO:0046128 purine ribonucleoside metabolic process IEP HCCA
BP GO:0046129 purine ribonucleoside biosynthetic process IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
MF GO:0050483 IMP 5'-nucleotidase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901659 glycosyl compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000713 Mur_ligase_N 332 407
IPR013221 Mur_ligase_cen 420 624
IPR004101 Mur_ligase_C 645 728
No external refs found!