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  5. Mp2g04980.1

Mp2g04980.1


Description : tRNA/rRNA cytidine acetyltransferase. rRNA cytidine acetyltransferase


Gene families : OG0005981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g04980.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00149090 evm_27.TU.AmTr_v1... RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G10490 No alias Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) 0.17 OrthoFinder output from all 47 species
AT3G57940 No alias Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) 0.22 OrthoFinder output from all 47 species
Aev_g05493 No alias tRNA cytidine acetyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02591 No alias tRNA cytidine acetyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g07469 No alias tRNA cytidine acetyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065787 No alias tRNA cytidine acetyltransferase & original description:... 0.06 OrthoFinder output from all 47 species
Cba_g02104 No alias tRNA cytidine acetyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.19G059500.1 Ceric.19G059500 tRNA cytidine acetyltransferase & original description:... 0.07 OrthoFinder output from all 47 species
Cre03.g192850 No alias RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.21 OrthoFinder output from all 47 species
Dcu_g10728 No alias tRNA cytidine acetyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04016 No alias tRNA cytidine acetyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022250001 No alias RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
Gb_28297 No alias tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.08 OrthoFinder output from all 47 species
LOC_Os12g07300.1 LOC_Os12g07300 tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.23 OrthoFinder output from all 47 species
Lfl_g08165 No alias tRNA cytidine acetyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435179g0010 No alias tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.06 OrthoFinder output from all 47 species
MA_117698g0010 No alias RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g19363 No alias tRNA cytidine acetyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04435 No alias tRNA cytidine acetyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08715 No alias tRNA cytidine acetyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03973 No alias tRNA cytidine acetyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008523 No alias tRNA cytidine acetyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g08469 No alias tRNA cytidine acetyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g26506 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo140315 No alias RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc04g051670.3.1 Solyc04g051670 tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.2 OrthoFinder output from all 47 species
Spa_g26329 No alias tRNA cytidine acetyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05653 No alias tRNA cytidine acetyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026623_P001 Zm00001e026623 tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000182 GNAT_dom 523 752
IPR027992 tRNA_bind_dom 766 984
IPR013562 TmcA_N 106 200
IPR007807 Helicase_dom 281 482
No external refs found!