Mp1g23020.1

Description : threonine-tRNA ligase

Gene families : OG0001675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp1g23020.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g076092	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Aev_g02454	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Ala_g10719	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Aop_g04523	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0123.g048363	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.06	OrthoFinder output from all 47 species
Cba_g26634	EMB2761	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Ceric.13G009700.1	Ceric.13G009700	EC_6.1 ligase forming carbon-oxygen bond & original...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000169.10	EMB2761	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021537.23	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Cre06.g273300	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.05	OrthoFinder output from all 47 species
Dcu_g01544	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
GSVIVT01020206001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.01	OrthoFinder output from all 47 species
Gb_19674	No alias	threonine-tRNA ligase	0.02	OrthoFinder output from all 47 species
LOC_Os08g19850.1	LOC_Os08g19850	threonine-tRNA ligase	0.09	OrthoFinder output from all 47 species
Len_g12901	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Lfl_g01963	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
MA_34887g0010	No alias	Enzyme classification.EC_6 ligases.EC_6.1 ligase forming...	0.04	OrthoFinder output from all 47 species
MA_946438g0010	No alias	Enzyme classification.EC_6 ligases.EC_6.1 ligase forming...	0.02	OrthoFinder output from all 47 species
Nbi_g07455	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Pir_g05250	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Sam_g12652	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Smo130418	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.05	OrthoFinder output from all 47 species
Solyc05g005800.4.1	Solyc05g005800	threonine-tRNA ligase	0.04	OrthoFinder output from all 47 species
Spa_g05753	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Spa_g15756	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Tin_g28822	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
Zm00001e004544_P001	Zm00001e004544	threonine-tRNA ligase	0.02	OrthoFinder output from all 47 species
Zm00001e012332_P002	Zm00001e012332	threonine-tRNA ligase	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity	IEP	HCCA
MF	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity	IEP	HCCA
MF	GO:0004637	phosphoribosylamine-glycine ligase activity	IEP	HCCA
MF	GO:0004814	arginine-tRNA ligase activity	IEP	HCCA
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006144	purine nucleobase metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006177	GMP biosynthetic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	HCCA
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
MF	GO:0019238	cyclohydrolase activity	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046037	GMP metabolic process	IEP	HCCA
BP	GO:0046112	nucleobase biosynthetic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002314	aa-tRNA-synt_IIb	409	615
IPR012947	tRNA_SAD	256	305
IPR004154	Anticodon-bd	627	716
IPR004095	TGS	88	147

External Links

No external refs found!

Mp1g23020.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation